Performs analysis of output dynamic of the oscillatory network syncnet to extract information about cluster allocation. More...
Public Member Functions | |
def | __init__ (self, phase, time, pointer_sync_analyser) |
Constructor of the analyser. More... | |
def | __del__ (self) |
Desctructor of the analyser. | |
def | allocate_clusters (self, eps=0.01, indexes=None, iteration=None) |
Returns list of clusters in line with state of ocillators (phases). More... | |
def | get_cluster_encoding (self) |
Returns clustering result representation type that indicate how clusters are encoded. More... | |
Public Member Functions inherited from pyclustering.nnet.sync.sync_dynamic | |
def | output (self) |
(list) Returns output dynamic of the Sync network (phase coordinates of each oscillator in the network) during simulation. | |
def | time (self) |
(list) Returns sampling times when dynamic is measured during simulation. | |
def | __init__ (self, phase, time, ccore=None) |
Constructor of Sync dynamic. More... | |
def | __del__ (self) |
Default destructor of Sync dynamic. | |
def | __len__ (self) |
Returns number of simulation steps that are stored in dynamic. More... | |
def | __getitem__ (self, index) |
Indexing of the dynamic. | |
def | allocate_sync_ensembles (self, tolerance=0.01, indexes=None, iteration=None) |
Allocate clusters in line with ensembles of synchronous oscillators where each synchronous ensemble corresponds to only one cluster. More... | |
def | allocate_phase_matrix (self, grid_width=None, grid_height=None, iteration=None) |
Returns 2D matrix of phase values of oscillators at the specified iteration of simulation. More... | |
def | allocate_correlation_matrix (self, iteration=None) |
Allocate correlation matrix between oscillators at the specified step of simulation. More... | |
def | calculate_order_parameter (self, start_iteration=None, stop_iteration=None) |
Calculates level of global synchorization (order parameter). More... | |
def | calculate_local_order_parameter (self, oscillatory_network, start_iteration=None, stop_iteration=None) |
Calculates local order parameter. More... | |
Performs analysis of output dynamic of the oscillatory network syncnet to extract information about cluster allocation.
Definition at line 50 of file syncnet.py.
def pyclustering.cluster.syncnet.syncnet_analyser.__init__ | ( | self, | |
phase, | |||
time, | |||
pointer_sync_analyser | |||
) |
Constructor of the analyser.
[in] | phase | (list): Output dynamic of the oscillatory network, where one iteration consists of all phases of oscillators. |
[in] | time | (list): Simulation time. |
[in] | pointer_sync_analyser | (POINTER): Pointer to CCORE analyser, if specified then other arguments can be omitted. |
Definition at line 56 of file syncnet.py.
def pyclustering.cluster.syncnet.syncnet_analyser.allocate_clusters | ( | self, | |
eps = 0.01 , |
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indexes = None , |
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iteration = None |
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) |
Returns list of clusters in line with state of ocillators (phases).
[in] | eps | (double): Tolerance level that define maximal difference between phases of oscillators in one cluster. |
[in] | indexes | (list): List of real object indexes and it should be equal to amount of oscillators (in case of 'None' - indexes are in range [0; amount_oscillators]). |
[in] | iteration | (uint): Iteration of simulation that should be used for allocation. |
Definition at line 79 of file syncnet.py.
Referenced by pyclustering.gcolor.hysteresis.hysteresis_analyser.allocate_map_coloring().
def pyclustering.cluster.syncnet.syncnet_analyser.get_cluster_encoding | ( | self | ) |
Returns clustering result representation type that indicate how clusters are encoded.
Definition at line 94 of file syncnet.py.