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Performs analysis of output dynamic of the oscillatory network syncnet to extract information about cluster allocation. More...
Inheritance diagram for pyclustering.cluster.syncnet.syncnet_analyser: Collaboration diagram for pyclustering.cluster.syncnet.syncnet_analyser:Public Member Functions | |
| def | __init__ (self, phase, time, pointer_sync_analyser) |
| Constructor of the analyser. More... | |
| def | __del__ (self) |
| Desctructor of the analyser. | |
| def | allocate_clusters (self, eps=0.01, indexes=None, iteration=None) |
| Returns list of clusters in line with state of oscillators (phases). More... | |
| def | get_cluster_encoding (self) |
| Returns clustering result representation type that indicate how clusters are encoded. More... | |
| Public Member Functions inherited from pyclustering.nnet.sync.sync_dynamic | |
| def | output (self) |
| (list) Returns output dynamic of the Sync network (phase coordinates of each oscillator in the network) during simulation. | |
| def | time (self) |
| (list) Returns sampling times when dynamic is measured during simulation. | |
| def | __init__ (self, phase, time, ccore=None) |
| Constructor of Sync dynamic. More... | |
| def | __del__ (self) |
| Default destructor of Sync dynamic. | |
| def | __len__ (self) |
| Returns number of simulation steps that are stored in dynamic. More... | |
| def | __getitem__ (self, index) |
| Indexing of the dynamic. | |
| def | allocate_sync_ensembles (self, tolerance=0.01, indexes=None, iteration=None) |
| Allocate clusters in line with ensembles of synchronous oscillators where each synchronous ensemble corresponds to only one cluster. More... | |
| def | allocate_phase_matrix (self, grid_width=None, grid_height=None, iteration=None) |
| Returns 2D matrix of phase values of oscillators at the specified iteration of simulation. More... | |
| def | allocate_correlation_matrix (self, iteration=None) |
| Allocate correlation matrix between oscillators at the specified step of simulation. More... | |
| def | calculate_order_parameter (self, start_iteration=None, stop_iteration=None) |
| Calculates level of global synchorization (order parameter). More... | |
| def | calculate_local_order_parameter (self, oscillatory_network, start_iteration=None, stop_iteration=None) |
| Calculates local order parameter. More... | |
Performs analysis of output dynamic of the oscillatory network syncnet to extract information about cluster allocation.
Definition at line 50 of file syncnet.py.
| def pyclustering.cluster.syncnet.syncnet_analyser.__init__ | ( | self, | |
| phase, | |||
| time, | |||
| pointer_sync_analyser | |||
| ) |
Constructor of the analyser.
| [in] | phase | (list): Output dynamic of the oscillatory network, where one iteration consists of all phases of oscillators. |
| [in] | time | (list): Simulation time. |
| [in] | pointer_sync_analyser | (POINTER): Pointer to CCORE analyser, if specified then other arguments can be omitted. |
Definition at line 56 of file syncnet.py.
| def pyclustering.cluster.syncnet.syncnet_analyser.allocate_clusters | ( | self, | |
eps = 0.01, |
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indexes = None, |
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iteration = None |
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| ) |
Returns list of clusters in line with state of oscillators (phases).
| [in] | eps | (double): Tolerance that defines the maximum difference between phases of oscillators that belong to one cluster. |
| [in] | indexes | (list): List of real object indexes and it should be equal to amount of oscillators (in case of 'None' - indexes are in range [0; amount_oscillators]). |
| [in] | iteration | (uint): Iteration of simulation that should be used for allocation. |
Definition at line 79 of file syncnet.py.
Referenced by pyclustering.gcolor.hysteresis.hysteresis_analyser.allocate_map_coloring().
| def pyclustering.cluster.syncnet.syncnet_analyser.get_cluster_encoding | ( | self | ) |
Returns clustering result representation type that indicate how clusters are encoded.
Definition at line 94 of file syncnet.py.
1.8.13